CDS

Accession Number TCMCG051C12031
gbkey CDS
Protein Id XP_024452909.1
Location join(19352575..19353441,19353572..19353869,19353955..19354178,19354499..19354662,19354751..19354850)
Gene LOC18097152
GeneID 18097152
Organism Populus trichocarpa

Protein

Length 550aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024597141.1
Definition protein SUPPRESSOR OF GENE SILENCING 3 isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category S
Description Protein SUPPRESSOR OF GENE SILENCING
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0002252        [VIEW IN EMBL-EBI]
GO:0002376        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005655        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006955        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009615        [VIEW IN EMBL-EBI]
GO:0009616        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010025        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010050        [VIEW IN EMBL-EBI]
GO:0010166        [VIEW IN EMBL-EBI]
GO:0010267        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016246        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0030422        [VIEW IN EMBL-EBI]
GO:0030677        [VIEW IN EMBL-EBI]
GO:0030681        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031050        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0035821        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043331        [VIEW IN EMBL-EBI]
GO:0044003        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044403        [VIEW IN EMBL-EBI]
GO:0044419        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045087        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051607        [VIEW IN EMBL-EBI]
GO:0051701        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0051817        [VIEW IN EMBL-EBI]
GO:0052018        [VIEW IN EMBL-EBI]
GO:0052249        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070918        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071359        [VIEW IN EMBL-EBI]
GO:0071407        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:0098586        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901568        [VIEW IN EMBL-EBI]
GO:1901570        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901699        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902555        [VIEW IN EMBL-EBI]
GO:1905348        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCAAAAAAACAAGACCTCTTTGATCTTGTAAACGTGAATGATGGTTCCTCTCCATCTTTCTCTTACAAATCTGAATCAGAAGATGATATTTTGCAAGAAGCTGCTGAATTTGCTGAAGAGCTCCAGTTACAAGAGCCTCTAAAGGCTTCGTTGGTCAGTTGCCCAATGGCAAGCAATGTGTCATCATCAACTTCGTCCAGGACCAATATGGAAGCAATTTCAGAACAAGAAATTGCTGATGCCAGTTGCAGCAATAACAATCCAACTCTCATGACTGAAACAGAAGCAGTTAGTCGTGGTGCAGCGAAAATTATAAGTCACAATTCAGCACAAGATGAGTGTAGGAAAAGAGCTGAAAGCATTGCTGCAAAACAGGAGGGTACTCCACAGAGTTCCAATACTAAAGCAAAGAAAGATAAAGGTGTGGATCCGAATTCAGACATTCCACTTAATGTTAAATCTGAATCGCTGGTCAGCAGAGGAAACGGAGGTGCATTGGATGATAACAAGAAGAGCAGATTGTCCAAGGAATTGGCACCTAAGATTGTCAATAAACCTATTGAGCAGTTTTACTGTCCTGCATGCGCAGAAGTTCCTGATACCATCAAATGGTACCCAGGCCTGCAGGCCCTGATATCACATGCCAGAAAAACCACTAAAGGAAAAAGGGCTCAACTCCACCAGAACCTAGAAAAGCAGCTGACAAGGAAGTTCGGCAGAAAGGGAACTTCTGATAGTTCTGGTGGTGAAGTGCTAAGTAAATGGAAAGGTCTAAAAGATGAGAATAAAGATCATGAGATCGTTTGGCCTCCTATGGTTGTTGTTAGGAATACAGCAAGCCTTAAAAAAGACGAGAACAATAAGCGGATTGGCATAACAGATCAGGAACTCCTTGATTTGTTCAGCTCATATGAAGCTATTGAGAAGGTTCAACATGCATGCAATTCGAATGGACATTGTGGGATGAGTATTTTGATTTTTGAGGGCTCAACAAGAGGCTATTTAGAGGCAGAGCGCCTGGATAGACATTTCGCAGATGAAGGAACTGGTAGAAATCTTTGGAATGAAAGTCCACTCTACCTCCTACGAAGTGGGGAGATCCAACTTCACGGTTACATGGCAGAGAAAAAGGACGTGGATCTCTTCAACCAGTATTCAACAGGTGAACCCAAGCTGAAATATTTAATTACATCATACCAAGATACGGTCGTGAACCGAATCAGGCAAATGAGTGAGGACGATAACAAGCGTATCTGGCTGAATAACAGGGTAGAACGTCTTGAAGAATCAAATGGCATAATGAGGGAGATCCTGTTAAAGGTAATGAAGGAAATTGATATTTTGAGAAAGGAAAATAAATTGCAGCACGAACAGAACATAGAAGAGATGGGTTTTCAAGGACAAATTTTCGAAGACAGCCAAATAAAGACTAATGTTGACGAGAGAGGTAAAAAGGGAGGGAATCTTGAGAGCTCAAAGGAGGACGAGGAGCACGGAAATGTCCATGAATCCAATGGGAGTCCTTCAAATACACAGGATGGCAATTCCAGAGTGCCGGAAACTGCCAAGGCCAAAGGGAATGAAGTGAAAGAAAAGGAAGTAGCTGACACGGGTAAAGCTAGTAGAAGAACAAGGAAGAAGACAAAATGA
Protein:  
MAKKQDLFDLVNVNDGSSPSFSYKSESEDDILQEAAEFAEELQLQEPLKASLVSCPMASNVSSSTSSRTNMEAISEQEIADASCSNNNPTLMTETEAVSRGAAKIISHNSAQDECRKRAESIAAKQEGTPQSSNTKAKKDKGVDPNSDIPLNVKSESLVSRGNGGALDDNKKSRLSKELAPKIVNKPIEQFYCPACAEVPDTIKWYPGLQALISHARKTTKGKRAQLHQNLEKQLTRKFGRKGTSDSSGGEVLSKWKGLKDENKDHEIVWPPMVVVRNTASLKKDENNKRIGITDQELLDLFSSYEAIEKVQHACNSNGHCGMSILIFEGSTRGYLEAERLDRHFADEGTGRNLWNESPLYLLRSGEIQLHGYMAEKKDVDLFNQYSTGEPKLKYLITSYQDTVVNRIRQMSEDDNKRIWLNNRVERLEESNGIMREILLKVMKEIDILRKENKLQHEQNIEEMGFQGQIFEDSQIKTNVDERGKKGGNLESSKEDEEHGNVHESNGSPSNTQDGNSRVPETAKAKGNEVKEKEVADTGKASRRTRKKTK